Last year’s tax, or an estimate that has since changed
Tax projections often put last year’s total tax beside this year’s, and a first estimate beside a revised one, with the state tax underneath. Software can copy the wrong column or the older figure.
Payments that don’t belong to this return
Payment records mix federal and state estimates, next year’s first installment and the extension payment itself. Software that adds every payment it finds, or goes by the date paid, gets the total wrong.
A balance due that nobody updated
A worksheet’s summary page can be printed before the estimate changes, so the balance it shows no longer matches the lines above it. Software that copies the printed balance fills a number that doesn’t add up.
Two names on a joint return
A joint extension names both spouses. Payment receipts and bank records often show only one of them, and software can fill that one name.
A trip abroad, and a foreign address in the file
The “out of the country” box has a meaning of its own, as the form explains. Software can tick it because someone is abroad on the due date, or take a temporary foreign address for the mailing address.
The wrong payment and the wrong confirmation number
A payment printout often holds more than one confirmation, for example the extension payment and next year’s first estimate. Software can take the first number, the other payment’s amount, or the bank account digits.